| # | Title | Rating | Length |
|---|
| 1 | Ship of Stars / Green Hand (Who Mourns for Adonais?) | | 1:52 |
| 2 | Giant Hand (Who Mourns for Adonais?) | | 1:15 |
| 3 | Apollo Motif (Who Mourns for Adonais?) | | 1:14 |
| 4 | Apollo's Power / Kirk's Theme / Apollo's Temple (Who Mourns for Adonais?) | | 3:18 |
| 5 | Stingers / Giant Apollo (Who Mourns for Adonais?) | | 1:05 |
| 6 | Spaceship Stuck / Apollo Fades / Kirk to Apollo (Who Mourns for Adonais?) | | 1:19 |
| 7 | Apollo Digs Carolyn / Apollo's Fist / New Venus (Who Mourns for Adonais?) | | 2:40 |
| 8 | Computer Generator (Who Mourns for Adonais?) | | 0:36 |
| 9 | Apollo's Temple #2 (Who Mourns for Adonais?) | | 3:00 |
| 10 | Apollo Zaps (Who Mourns for Adonais?) | | 1:03 |
| 11 | Apollo Weakens / Kirk to Enterprise / Bridge to Apollo (Who Mourns for Adonais?) | | 1:16 |
| 12 | Kirk Worried (Who Mourns for Adonais?) | | 0:43 |
| 13 | Apollo in Love (Who Mourns for Adonais?) | | 0:46 |
| 14 | Dreamy Venus / Kirk and Carolyn / Spaceship Stuck Again (Who Mourns for Adonais?) | | 2:36 |
| 15 | Apollo's Kiss / Apollo's Storm / Final Battle (Who Mourns for Adonais?) | | 3:38 |
| 16 | End of Apollo / Spaceship Orbit (Who Mourns for Adonais?) | | 2:54 |
| 17 | Mirror Mirror / Blackship Theme / The Agonizer (Mirror, Mirror) | | 2:25 |
| 18 | Blackship in Space / Blackship Underscore (Mirror, Mirror) | | 1:23 |
| 19 | Thematic Bridge / Blackship Tension (Mirror, Mirror) | | 2:21 |
| 20 | Suspicion (Mirror, Mirror) | | 1:15 |
| 21 | Evil Kirk / Evil Kirk #2 (Mirror, Mirror) | | 0:39 |
| 22 | Meet Marlena / Short Curtain (Mirror, Mirror) | | 2:02 |
| 23 | Blackship Theme (Mirror, Mirror) | | 0:49 |
| 24 | Pretty Marlena (Mirror, Mirror) | | 1:23 |
| 25 | Goodbye Marlena (Mirror, Mirror) | | 1:48 |
| 26 | Kelvan Theme / Neutralizer (By Any Other Name) | | 1:33 |
| 27 | More Neutralizer (By Any Other Name) | | 0:57 |
| 28 | Rojan's Revenge / Rojan's Blocks / Broken Block (By Any Other Name) | | 3:06 |
| 29 | More Blocks / Rallentando (By Any Other Name) | | 2:07 |
| 30 | Pretty Words / Short Playoff (By Any Other Name) | | 1:50 |
| 31 | Kelinda's Question / Rojan Roars / Kelinda's Kiss (By Any Other Name) | | 1:42 |
| 32 | Finale / Thematic Playoff (By Any Other Name) | | 1:19 |
| 33 | Drums (The Omega Glory) | | 0:22 |
| 34 | Star-Spangled Enterprise (Act Out) (The Omega Glory) | | 0:22 |
| 35 | Star-Spangled Enterprise (Episode Medley) (The Omega Glory) | | 0:40 |
| 36 | Star-Spangled Enterprise (Outtakes Medley) (The Omega Glory) | | 0:43 |
| 37 | Kirk to Apollo (Who Mourns for Adonais?) [Second Season Library Music] | | 0:28 |
| 38 | The Agonizer (Mirror, Mirror) [Second Season Library Music] | | 0:27 |
| 39 | Blackship in Space M13a (Mirror, Mirror) [Second Season Library Music] | | 0:40 |
| 40 | Blackship in Space M13b (Mirror, Mirror) [Second Season Library Music] | | 0:24 |
| 41 | Blackship Tension M21aa (Mirror, Mirror) [Second Season Library Music] | | 1:04 |
| 42 | Blackship Tension M21a (Mirror, Mirror) [Second Season Library Music] | | 0:38 |
| 43 | Suspicion (Mirror, Mirror) [Second Season Library Music] | | 0:40 |
| 44 | Meet Marlena (Mirror, Mirror) [Second Season Library Music] | | 0:51 |
| 45 | Kelvan Theme (By Any Other Name) [Second Season Library Music] | | 0:42 |
| 46 | Neutralizer (By Any Other Name) [Second Season Library Music] | | 1:02 |
| 47 | Rojan's Blocks (By Any Other Name) [Second Season Library Music] | | 0:42 |
| 48 | Short Playoff (By Any Other Name) [Second Season Library Music] | | 0:18 |
| 49 | Chess Game (Charlie X) [Second Season Library Music] | | 1:27 |
| 50 | Zap Sam (Charlie X) [Second Season Library Music] | | 1:13 |
| 51 | Goodbye Charlie (2 Versions) [Charlie X] [Second Season Library Music] | | 1:34 |
| 52 | Fesarius Approaches (The Corbomite Maneuver) | | 2:16 |
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